Page Contents
Workflows available
Assembly_Fetch
Augur
BaseSpace_Fetch
Cauris_CladeTyper
Concatenate_Column_Content
Core_Gene_SNP
Create_Terra_Table
CZGenEpi_Prep
Find_Shared_Variants
Freyja Workflow Series
GAMBIT_Query
Kraken2
kSNP3
Lyve_SET
MashTree_FASTA
Mercury_Prep_N_Batch
NCBI-AMRFinderPlus
Pangolin Update
RASUSA
Rename_FASTQ
Samples_to_Ref_Tree
Snippy_Streamline
Snippy_Streamline_FASTA
Snippy_Tree
Snippy_Variants
SRA_Fetch
TBProfiler_tNGS
Terra_2_GISAID
Terra_2_NCBI
TheiaCoV Workflow Series
TheiaEuk
TheiaMeta
TheiaProk Workflow Series
TheiaValidate
Transfer_Column_Content
Usher_PHB
VADR_Update
Zip_Column_Content
Overview
This set-level workflow will create a file containing all of the items from a given column in a Terra Data Table. This is useful when you want to investigate many results files. There is a video available with more information about the Concatenate_Column_Content workflow: 📺 Workflow Focus: Concatenate_Column_Content
Inputs
Tasks/Actions
The cat_files task will concatenate the indicated files into a single file with the name provided.
Outputs
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