Page Contents

<aside> ⚠️ If the Terra_2_NCBI workflow fails, DO NOT resubmit. ⚠️⚠️ ⚠️ ⚠️ ⚠️⚠️ ⚠️

Resubmission risks duplicate submissions and future failures.

Contact Theiagen ([email protected]) to determine the reason for failure, and only move forward with Theiagen’s guidance.

⚠️⚠️⚠️⚠️⚠️⚠️⚠️⚠️⚠️⚠️⚠️⚠️⚠️⚠️⚠️⚠️⚠️⚠️⚠️⚠️⚠️⚠️⚠️⚠️⚠️⚠️⚠️ ⚠️

</aside>

<aside> 🗝️ Key resources

Terra_2_NCBI-PATHOGEN-metadata-2024-04-30.xlsx

Terra_2_NCBI-MICROBE-metadata-2022-07-11.xlsx

Terra_2_NCBI-VIRUS-metadata-2022-09-09.xlsx

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The Terra_2_NCBI workflow is a programmatic data submission method to share metadata information with NCBI BioSample and paired-end Illumina reads with NCBI SRA directly from Terra without having to use the NCBI portal.

Prerequisites

Collating BioSample Metadata

Running the Workflow

Workflow Success

Limitations

Acknowledgments

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